36:10.1016/j.mito.2017.08.002
國際上首次用小RNA測序數據檢測人類病毒
Fang Wang, Yu Sun, Jishou Ruan, Rui Chen,
Xin Chen, Chengjie Chen, Jan F. Kreuze, ZhangJun Fei, Xiao Zhu, Shan Gao. Using
small RNA deep sequencing data to detect human viruses. BioMed Research
International 2016, 2016 (2016):2596782.
各種小RAN以及小RNA數據分析等
Xiaoran Niu, Yu
Sun, Ze Chen, Rugang Li, Chellappan Padmanabhan, Jishou Ruan, Jan F. Kreuze,
Kaishu Ling, Zhangjun Fei and Shan Gao. Using Small RNA-seq Data to Detect siRNA
Duplexes Induced by Plant Viruses. Genes 2017, 8(6):10.3390/genes8060163.
Ze Chen, Yu Sun,
Xiaojun Yang, Zhenfeng Wu, Kaifei Guo, Xiaoran Niu, Qingsong Wang, Jishou
Ruan, Wenjun Bu, Shan Gao. Two featured series of rRNA-derived RNA fragments
(rRFs) constitute a novel class of small RNAs. PLoS ONE 2017,
12(4):0176458.
這個是U1 snRNA研究
Zhi Cheng, Yingchun Shang, Shan Gao, Tao Zhang. Overexpression of U1
snRNA induces decrease of U1 spliceosome function associated with Alzheimer’s
disease. Journal of neurogenetics, 2017:1
這個有安捷倫系列芯片的很多術語非常重要
Zhi Cheng, Yu Sun1, Xiaoran Niu, Yingchun
Shang, Jishou Ruan, Ze Chen, Shan Gao and Tao Zhang. Gene expression
profiling reveals U1 snRNA regulates cancer gene expression. Oncotarget 2018
Zhi Cheng, Yingchun Shang, Shan Gao, Tao Zhang. Overexpression of U1
snRNA induces decrease of U1 spliceosome function associated with Alzheimer’s
disease. Journal of neurogenetics, 2017:1
這裡有R語言機器學習很多包，其實是我多年代碼的集合，
Yaping
Fang, Shan Gao(co-first), David Tai, C Russell Middaugh, Jianwen Fang.
Identification of properties important to protein aggregation using feature
selection. BMC Bioinformatics 2013, 14(1):314.
我這裡有一個多種癌症數據集很重要
Shan
Gao, Shuo Xu, Yaping Fang, Jianwen Fang. Prediction of core cancer genes
using multi-task classification framework. Journal of Theoretical Biology
2013, 317:62-70.
機器學習很多重要詞語，我的反覆琢磨過
Shan
Gao, Ning Zhang, Guangyou Duan, Zhuoyang, Jishou Ruan, Tao Zhang. Prediction
of function changes associated with single-point protein mutations using
support vector machines (SVMs). Human Mutation 2009, 30(8):1161-1166.
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